Whole Slide Images (WSI) module

Classes

class fast::PatchGenerator

Generates a stream of patches from an ImagePyramid or 3D Image.

class fast::PatchStitcher

Stitch a stream of processed patches from the PatchGenerator.

class fast::ImagePyramidLevelExtractor

Extract a level of an image pyramid as an image.

class fast::TissueMicroArrayExtractor

Extract tissue micro arrays (TMAs) from a whole-slide image.

class fast::TissueSegmentation

Segment tissue from a WSI.

class fast::ImagePyramid

Image pyramid data object.

class fast::ImagePyramidPatchExporter

Exports an ImagePyramid to disk as a large set of image patches. Each patch is stored as a PNG image with the file name indicating its position and size. This exporter can handle both an ImagePyramid input and a stream of image patches.

class fast::TIFFImagePyramidExporter

Export an ImagePyramid to disk in the tiled pyramid TIFF format.

class fast::WholeSlideImageImporter

Read a whole slide image from disk.

class fast::ImagePyramidRenderer

Renders tiled image pyramids.

Enums

enum class ImageCompression { UNSPECIFIED, RAW, JPEG, JPEG2000, LZW, NEURAL_NETWORK, DEFLATE }

Image compression types for ImagePyramids.

Enum documentation