FAST  3.2.0
Framework for Heterogeneous Medical Image Computing and Visualization
Public Member Functions | List of all members
fast::CoherentPointDriftRigid Class Reference

#include <Rigid.hpp>

+ Inheritance diagram for fast::CoherentPointDriftRigid:
+ Collaboration diagram for fast::CoherentPointDriftRigid:

Public Member Functions

 CoherentPointDriftRigid ()
 
void maximization (MatrixXf &fixedPoints, MatrixXf &movingPoints) override
 
void initializeVarianceAndMore () override
 
- Public Member Functions inherited from fast::CoherentPointDrift
void setFixedMeshPort (DataChannel::pointer port)
 
void setFixedMesh (Mesh::pointer data)
 
void setMovingMeshPort (DataChannel::pointer port)
 
void setMovingMesh (Mesh::pointer data)
 
void setMaximumIterations (unsigned char maxIterations)
 
void setUniformWeight (float uniformWeight)
 
void setTolerance (double tolerance)
 
AffineTransformation::pointer getOutputTransformation ()
 
void expectation (MatrixXf &fixedPoints, MatrixXf &movingPoints)
 
- Public Member Functions inherited from fast::ProcessObject
virtual ~ProcessObject ()
 
void update (int executeToken=-1)
 
RuntimeMeasurement::pointer getRuntime ()
 
RuntimeMeasurement::pointer getRuntime (std::string name)
 
RuntimeMeasurementsManager::pointer getAllRuntimes ()
 
void enableRuntimeMeasurements ()
 
void disableRuntimeMeasurements ()
 
void setMainDevice (ExecutionDevice::pointer device)
 
void setMainDeviceCriteria (const DeviceCriteria &citeria)
 
ExecutionDevice::pointer getMainDevice () const
 
void setDevice (uint deviceNumber, ExecutionDevice::pointer device)
 
void setDeviceCriteria (uint deviceNumber, const DeviceCriteria &criteria)
 
ExecutionDevice::pointer getDevice (uint deviceNumber) const
 
virtual DataChannel::pointer getOutputPort (uint portID=0)
 
virtual DataChannel::pointer getInputPort (uint portID=0)
 
virtual void setInputConnection (DataChannel::pointer port)
 
virtual void setInputConnection (uint portID, DataChannel::pointer port)
 
virtual void setInputData (DataObject::pointer data)
 
virtual void setInputData (uint portID, DataObject::pointer data)
 
int getNrOfInputConnections () const
 
int getNrOfOutputPorts () const
 
virtual std::string getNameOfClass () const =0
 
virtual void loadAttributes ()
 
std::shared_ptr< AttributegetAttribute (std::string id)
 
std::unordered_map< std::string, std::shared_ptr< Attribute > > getAttributes ()
 
void setAttributes (std::vector< std::shared_ptr< Attribute >> attributes)
 
void stopPipeline ()
 
void setModified (bool modified)
 
template<class DataType >
std::shared_ptr< DataTypeupdateAndGetOutputData (uint portID=0)
 
- Public Member Functions inherited from fast::Object
 Object ()
 
virtual ~Object ()
 
ReportergetReporter ()
 

Additional Inherited Members

- Public Types inherited from fast::CoherentPointDrift
enum  TransformationType { RIGID, AFFINE, NONRIGID }
 
- Public Types inherited from fast::ProcessObject
typedef std::shared_ptr< ProcessObjectpointer
 
- Public Types inherited from fast::Object
typedef std::shared_ptr< Objectpointer
 
- Static Public Member Functions inherited from fast::ProcessObject
static std::string getStaticNameOfClass ()
 
- Static Public Member Functions inherited from fast::Object
static std::string getStaticNameOfClass ()
 
- Protected Member Functions inherited from fast::CoherentPointDrift
 CoherentPointDrift ()
 
void execute ()
 
- Protected Member Functions inherited from fast::ProcessObject
 ProcessObject ()
 
virtual void preExecute ()
 
virtual void postExecute ()
 
template<class DataType >
void createInputPort (uint portID, bool required=true)
 
template<class DataType >
void createOutputPort (uint portID)
 
template<class DataType >
std::shared_ptr< DataTypegetInputData (uint portID=0)
 
template<class DataType >
std::shared_ptr< DataTypegetOutputData (uint portID=0)
 
void addOutputData (uint portID, DataObject::pointer data)
 
bool hasNewInputData (uint portID)
 
virtual void waitToFinish ()
 
void createOpenCLProgram (std::string sourceFilename, std::string name="")
 
cl::Program getOpenCLProgram (std::shared_ptr< OpenCLDevice > device, std::string name="", std::string buildOptions="")
 
void createFloatAttribute (std::string id, std::string name, std::string description, float initialValue)
 
void createIntegerAttribute (std::string id, std::string name, std::string description, int initialValue)
 
void createBooleanAttribute (std::string id, std::string name, std::string description, bool initialValue)
 
void createStringAttribute (std::string id, std::string name, std::string description, std::string initialValue)
 
float getFloatAttribute (std::string id)
 
int getIntegerAttribute (std::string id)
 
bool getBooleanAttribute (std::string id)
 
std::string getStringAttribute (std::string id)
 
std::vector< float > getFloatListAttribute (std::string id)
 
std::vector< int > getIntegerListAttribute (std::string id)
 
std::vector< bool > getBooleanListAttribute (std::string id)
 
std::vector< std::string > getStringListAttribute (std::string id)
 
void changeDeviceOnInputs (uint deviceNumber, ExecutionDevice::pointer device)
 
void validateInputPortExists (uint portID)
 
void validateOutputPortExists (uint portID)
 
- Protected Member Functions inherited from fast::Object
ReporterreportError ()
 
ReporterreportWarning ()
 
ReporterreportInfo ()
 
ReporterEnd reportEnd () const
 
- Protected Attributes inherited from fast::CoherentPointDrift
MatrixXf mFixedPoints
 
MatrixXf mMovingPoints
 
MatrixXf mMovingMeanInitial
 
MatrixXf mFixedMeanInitial
 
MatrixXf mResponsibilityMatrix
 
unsigned int mNumFixedPoints
 
unsigned int mNumMovingPoints
 
unsigned int mNumDimensions
 
float mUniformWeight
 
double mTolerance
 
double mScale
 
double mVariance
 
double mObjectiveFunction
 
double mFixedNormalizationScale
 
double mMovingNormalizationScale
 
AffineTransformation::pointer mTransformation
 
unsigned char mIteration
 
bool mRegistrationConverged
 
double timeE
 
double timeEDistances
 
double timeENormal
 
double timeEPosterior
 
double timeEPosteriorDivision
 
double timeM
 
double timeMUseful
 
double timeMCenter
 
double timeMSVD
 
double timeMParameters
 
double timeMUpdate
 
- Protected Attributes inherited from fast::ProcessObject
bool mIsModified
 
int m_lastExecuteToken = -1
 
RuntimeMeasurementsManager::pointer mRuntimeManager
 
std::unordered_map< uint, bool > mRequiredInputs
 
std::unordered_map< uint, std::vector< uint > > mInputDevices
 
std::unordered_map< uint, ExecutionDevice::pointermDevices
 
std::unordered_map< uint, DeviceCriteriamDeviceCriteria
 
std::unordered_map< uint, DataChannel::pointermInputConnections
 
std::unordered_map< uint, std::vector< std::weak_ptr< DataChannel > > > mOutputConnections
 
std::unordered_map< uint, bool > mInputPorts
 
std::unordered_set< uintmOutputPorts
 
std::unordered_map< uint, std::pair< DataObject::pointer, uint64_t > > mLastProcessed
 
std::unordered_map< std::string, std::shared_ptr< OpenCLProgram > > mOpenCLPrograms
 
std::unordered_map< std::string, std::shared_ptr< Attribute > > mAttributes
 
std::unordered_map< std::string, std::string > m_frameData
 
std::unordered_set< std::string > m_lastFrame
 
int m_maximumNrOfFrames = -1
 
- Protected Attributes inherited from fast::Object
std::weak_ptr< ObjectmPtr
 

Constructor & Destructor Documentation

◆ CoherentPointDriftRigid()

fast::CoherentPointDriftRigid::CoherentPointDriftRigid ( )

Member Function Documentation

◆ initializeVarianceAndMore()

void fast::CoherentPointDriftRigid::initializeVarianceAndMore ( )
overridevirtual

◆ maximization()

void fast::CoherentPointDriftRigid::maximization ( MatrixXf &  fixedPoints,
MatrixXf &  movingPoints 
)
overridevirtual

The documentation for this class was generated from the following file: